You sound like you've done all the footwork to determine where the problem isn't..differential and transmission final drive seem ok.
I don't think there is anything we can answer that you don't already know. Time to get your hands dirty partner..grab a manual and some tools and have at it.
Current toys..
1986 Honda 350X..trail bomb!
1985 Honda 250SX..my main mudder
1985 Honda 250ES..Back in Black Trike
Current non-trike toys:
1990 Honda TRX300FW
1995 Seadoo GTX
1998 Polaris Indy Lite 340(Nearly new looking)
1998 Polaris Touring 500
1998 Club Car (electric)