I check many places for every part to get the best price. Between different shipping rates on different items it just depends what your looking for.
Here is a couple of my old links. I get 20% off now at a local place so I don't mail order much anymore. Hope they help you start out.
http://www.chaparral-racing.com/
http://www.denniskirk.com/OffRoad.htm
http://www.powersportspro.com/partsfish/login.asp
http://www.whitebros.com/
http://www.ebay.com/
'02 Honda 416ex - A seasoned blend of 11 herbs and spices
'04 Honda Recon - The yard machine and snow plow
'88 Honda CR250R - Another chapter in my torrid all terrain affair